Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSRPIGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIREFTWQMVNFLLTKNVKMIVIACNTATAVAWQEIKEKLDIPVLGVILPGASAAIKSTNSGKVGIIGTPMTVKSDAYRQKIQALSPNTAVVSLACPKFVPIVESNQMSSSLAKKVVYETLSPLVGKLDTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEINHNWQNKHGGHH---FYTTASPKGFKEIAEQWLSQEINVERIVL
1B74 Chain:A ((3-229))
-----IGIFDSGVGGLTVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLKDKGVDIIVVACNTASAYALERLKKEINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKSGAYQRKLE--EGGADVFAKACPLFAPLAEEGLLEGEITRKVVEHYLKEFKGKIDTLILGCTHYPLLKKEIKKFLG-DAEVVDSSEA----LSLSL------HNFIKDDGSSSLELFFTDLSPNLQFLIKLILGRDYPVKLAEGV
General information:
TITO was launched using:
RESULT:
Template:
1B74.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -195636 for 1904 contacts (-102.8/contact) +
2D Compatibility (PS) -24156 + (NN) -10633 + (LL) 1168
1D Compatibility (HY) -23600 + (ID) 4800
Total energy: -257657.0 ( -135.32 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_1B74.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B74-query.scw
PDB file :
Tito_Scwrl_1B74.pdb
: