Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------MLTSKQRAFLKSEAHSMKPIIQIGKNGLN-DQIKTSVRNALDARELIKVTLLQNTDEDIHDVAEVLEDEIGCDTVLKIGRILILYKESARKENRKISVKVKAVKSN
1ZLD Chain:A ((19-118))
GNIGQVDIDSVILGRPGAIGSWE---LNNFITIGLNRVNADTVRVNIRNTGRTNRLI-ITQWDNTVTR-GDVYELFG-----DYALIQGRGSFCLNIRSDTGRENWRMQLEN----
General information:
TITO was launched using:
RESULT:
Template:
1ZLD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12309 for 541 contacts (22.8/contact) +
2D Compatibility (PS) -9349 + (NN) 3801 + (LL) 1008
1D Compatibility (HY) 2000 + (ID) 300
Total energy: 9469.0 ( 17.50 by residue)
QMean score : 0.107
(partial model without unconserved sides chains):
PDB file :
Tito_1ZLD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZLD-query.scw
PDB file :
Tito_Scwrl_1ZLD.pdb
: