Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLMWDVLTGKESVRTLKKQLDKELIHSVYAPRKRSKFHDIITSHHKEI----DEVAINTKTAIHKVANQLDEAIKGEFRSKVEESIESNQQKYNHL
3DPP Chain:A ((146-205))
--------------------------------QTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKL
General information:
TITO was launched using:
RESULT:
Template:
3DPP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -525 for 321 contacts (-1.6/contact) +
2D Compatibility (PS) -5767 + (NN) 456 + (LL) 2752
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -5834.0 ( -18.17 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_3DPP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DPP-query.scw
PDB file :
Tito_Scwrl_3DPP.pdb
: