Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAIDKLVKASHLIDMNDIIREGNPTLRKVAEEVTFPLSEKEEI--LGEKMMQFLKHSQDPIMAEKLGLRGGVGLAAPQLDISKRIIAVLVPNVEDAQGNPPKEAYSLQEVMYNPKVVSHSVQDAALSDGEGCLSVDREVPGYVVRHARVTIEYFDKTGEKHRLKLKGYNSIVVQHEIDHIDGIMFYDRINEKNPFAVKEGLLILE
1VEV Chain:A ((5-169))
------------------ILRMGDPILRKISEPVTEDEIQTKEFKKLIRDMFDTMRHAE------------GVGLAAPQIGILKQIVVVGSEDNERYPGTPDVP----ERIILNP-VITPLTKDTS-GFWEGCLSVP-GMRGYVERPNQIRMQWMDEKGNQFDETIDGYKAIVYQHECDHLQGILYVDRLKDTKLFGFNETLDS--
General information:
TITO was launched using:
RESULT:
Template:
1VEV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47574 for 1275 contacts (-37.3/contact) +
2D Compatibility (PS) -17559 + (NN) -9905 + (LL) 3184
1D Compatibility (HY) -15200 + (ID) 3050
Total energy: -90104.0 ( -70.67 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_1VEV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VEV-query.scw
PDB file :
Tito_Scwrl_1VEV.pdb
: