Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFINNYTLKIGNRILLENTNLDFEEGEINHLLGRNGSGKSQL----AKDFIINRGNYFSND---------------IYEDTLI---ISSYSNLPSDVTINDLERTIPWKLSKEIYQLLNINQISKTVKLKQLSDGQKQKVKLLVLLSLDKHIIILDEITNALDKKSVDEINVFLQNYIQYYPEKIIINISHDINNIRSLKGNYFLIDNQKICKVDTLDDAISWYLGE |
| 2IT1 Chain:A ((6-220)) | --LENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFDEKDVTELPPKDRNVGLVFQNWALYPHMTVYKNIAFPLELRKAPREEIDKKVREVAKMLHIDKLLNRYPW-QLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKR-LQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2IT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -55940 for 1450 contacts (-38.6/contact) +
2D Compatibility (PS) -20175 + (NN) -933 + (LL) 496
1D Compatibility (HY) -8800 + (ID) 2550
Total energy: -87902.0 ( -60.62 by residue)
QMean score : 0.378
|
|
|