Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSEKEILDALSKVYSEEVIQADDYFRQAIFELASQLEKEGMNSLLATKIDSLINQYVLTHQFDAPKSIFDLSRLVKTKASHYKGTAISAIMLGSFLSGGPK
1H3O Chain:B ((61-93))
----KKLQDLVREV--DPNEQLDEDVEEMLLQIADDFIE---------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1H3O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4111 for 132 contacts (-31.1/contact) +
2D Compatibility (PS) -3221 + (NN) -1081 + (LL) 4108
1D Compatibility (HY) 0 + (ID) 300
Total energy: -4605.0 ( -34.89 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_1H3O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H3O-query.scw
PDB file :
Tito_Scwrl_1H3O.pdb
: