Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTAPFIAIEGPIGAGKTTLATMLSQ-KFGFPMINEIV-----------EDNPYLDKFYDNIKEWSFQLEMFFLCHRYK--------QLEDTSDHFLKKGQPVIADYHIYKNVIFAERTLSPHQLEKYKKIYHLLTDDLPKP---NFIIYIKASLPTLLHRIEKRGRPFEKKIETSYLEQLISDYEV-----AIKQLQEADPELTVLTVDGDSKDFVLNKSDFERIAAHVKELIV
4JLK Chain:A ((44-277))
------ISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSNLTMEQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNN--GQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVN-EDF---KDKYESLVEKVKEFL-
General information:
TITO was launched using:
RESULT:
Template:
4JLK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100064 for 1402 contacts (-71.4/contact) +
2D Compatibility (PS) -20635 + (NN) -10736 + (LL) 868
1D Compatibility (HY) -17200 + (ID) 2850
Total energy: -150617.0 ( -107.43 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_4JLK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JLK-query.scw
PDB file :
Tito_Scwrl_4JLK.pdb
: