Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRGGMGNMQKMMKQMQKMQKDMAKAQEELAEKVVEGTAGGGMVTVKANGQKEILDVIIKEEVVDPEDIDMLQDLVLAATNEALKKVDEITNETMGQFTKGMNMPGLF
1J8B Chain:A ((7-98))
-------LGGLMKQAQQ-QEKMQKMQEEIAQLEVTGESGAGLVKITINGAHNCRRIDIDPSLME-DDKEMLEDLIAAAFNDAVRRAEELQKEKMASVTAG-------
General information:
TITO was launched using:
RESULT:
Template:
1J8B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 16657 for 491 contacts (33.9/contact) +
2D Compatibility (PS) -9131 + (NN) -4459 + (LL) 312
1D Compatibility (HY) 4000 + (ID) 800
Total energy: 6579.0 ( 13.40 by residue)
QMean score : 0.203
(partial model without unconserved sides chains):
PDB file :
Tito_1J8B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J8B-query.scw
PDB file :
Tito_Scwrl_1J8B.pdb
: