Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGFLRKKTLR--REFDEKLTEQLFKQKEEWNRQKKLVEKSLEPSAEVLYELKVAEAKYFFYLREAKQRNLKISRWK
3GXQ Chain:A ((5-28))
-FFGKKKKVSLHLLVDPDMKDEIIK---------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3GXQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 303 for 63 contacts (4.8/contact) +
2D Compatibility (PS) -2294 + (NN) 807 + (LL) 5256
1D Compatibility (HY) -2000 + (ID) 250
Total energy: 1822.0 ( 28.92 by residue)
QMean score : 0.705
(partial model without unconserved sides chains):
PDB file :
Tito_3GXQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GXQ-query.scw
PDB file :
Tito_Scwrl_3GXQ.pdb
: