Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEPIFIIGIILGLVILLFLSGSAAKPLKWIGITAVKFVAGALLLVCVNMFGGSLGIHVPINLVTTAISGILGIPGI--AALVVIKQFII---
3FBL Chain:A ((1-82))
-------YHKLRLAIKEICKTDGIPNIKWGMYIAF---GEKLLKSYLKMKAGSASSDMIAEYINNAISAFSSRTGISQETAQKIADFITSNY
General information:
TITO was launched using:
RESULT:
Template:
3FBL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92151 for 494 contacts (-186.5/contact) +
2D Compatibility (PS) -8069 + (NN) -5285 + (LL) 1304
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -107151.0 ( -216.90 by residue)
QMean score : 0.333
(partial model without unconserved sides chains):
PDB file :
Tito_3FBL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FBL-query.scw
PDB file :
Tito_Scwrl_3FBL.pdb
: