Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDETVKLNHTCVICDQEKNRGIHLYTKFICLDCERKVISTSTSDPDYAFYVKKLKSIHTPPLYS
4QIW Chain:P ((8-39))
----------CAKCGKEVELDLATAREVRCPYCGSKILYKPR----------------------
General information:
TITO was launched using:
RESULT:
Template:
4QIW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11585 for 159 contacts (-72.9/contact) +
2D Compatibility (PS) -3190 + (NN) 258 + (LL) 1668
1D Compatibility (HY) -800 + (ID) 300
Total energy: -13949.0 ( -87.73 by residue)
QMean score : 0.273
(partial model without unconserved sides chains):
PDB file :
Tito_4QIW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QIW-query.scw
PDB file :
Tito_Scwrl_4QIW.pdb
: