Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYDVVIPAAGQGKRMKAGRNKLFIELKGDPVIIHTLR-VFDSHRQCDKIILVINEQEREHFQQLLSDYPFQTSIELVAGGDERQHSVYKGLKAVK---QEKIVLVHDGARPFIKHEQIDELIAEAEQTGAAILAV-PVKDTIKRVQ-DLQVSETIERSSLWAVQTPQAFRLSLLMKAHAEAERKGFLG--TDDASLVEQMEGGSVRVVEGSYTNIKLTTPDDLTSAEAIMESESGNKHV
3Q7U Chain:A ((11-229))
-----IVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEA-RQILGHRAM-----IVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSY----QRGSLDEYTDDASLVEHI-GGQVQVVDGDPLAFKITTKLDLLLAQAIV---------
General information:
TITO was launched using:
RESULT:
Template:
3Q7U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96934 for 1638 contacts (-59.2/contact) +
2D Compatibility (PS) -22340 + (NN) -7843 + (LL) 1772
1D Compatibility (HY) -16400 + (ID) 3950
Total energy: -145695.0 ( -88.95 by residue)
QMean score : 0.428
(partial model without unconserved sides chains):
PDB file :
Tito_3Q7U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q7U-query.scw
PDB file :
Tito_Scwrl_3Q7U.pdb
: