Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKVVKVVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTAD-QAGLIIPVEISVYEDRSFTFITKTPPAAVLLKKAAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAADVEAAMRMVEGTARSMGIVIED
5ADY Chain:I ((1-141))
-AKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKISRAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVED
General information:
TITO was launched using:
RESULT:
Template:
5ADY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57683 for 955 contacts (-60.4/contact) +
2D Compatibility (PS) -15389 + (NN) -13584 + (LL) 208
1D Compatibility (HY) -12800 + (ID) 4750
Total energy: -103998.0 ( -108.90 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_5ADY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5ADY-query.scw
PDB file :
Tito_Scwrl_5ADY.pdb
: