Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQAKAVARTVRIAPRKARLVMDLIRGKQVGEAVSILNLTPRAASPIIEKVLKSAIANAEHNYEMDANNLVISQAFVDEGPTLKRFRPRAMGRASQINKRTSHITIVVSEKKEG
2ZJP Chain:P ((26-131))
----AVAKYVRMSPRKVRLVVDVIRGKSVQDAEDLLRFIPRSASEPVAKVLNSAKANALHNDEMLEDRLFVKEAYVDAGPTLKRLIPRARGSANIIKKRTSHITIIVAEK---
General information:
TITO was launched using:
RESULT:
Template:
2ZJP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67703 for 754 contacts (-89.8/contact) +
2D Compatibility (PS) -10700 + (NN) -297 + (LL) 532
1D Compatibility (HY) -9200 + (ID) 3100
Total energy: -90468.0 ( -119.98 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_2ZJP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZJP-query.scw
PDB file :
Tito_Scwrl_2ZJP.pdb
: