Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLPKRVKYRREHRGKMRGRAKGGTEVHFGEFGIQALEASWITNRQIEAARIAMTRYMKRGGKVWIKIFPSKPYTAKPLEVRMGSGKGAPEGWVAVVKPGKVLFEISGVSEEVAREALRLASHKLPIKTKFVKREEIGGESNES
4WFN Chain:J ((6-136))
----KRTKFRKQFRGRMTGDAKGGDYVAFGDYGLIAMEPAWIKSNQIEACRIVMSRHFRRGGKIYIRIFPDKPVTKKPAETRMGKGKGAVEYWVSVVKPGRVMFEVAGVTEEQAKEAFRLAGHKLPIQTKMVKRE---------
General information:
TITO was launched using:
RESULT:
Template:
4WFN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28947 for 902 contacts (-32.1/contact) +
2D Compatibility (PS) -14239 + (NN) -4743 + (LL) 456
1D Compatibility (HY) -12000 + (ID) 4050
Total energy: -63523.0 ( -70.42 by residue)
QMean score : 0.417
(partial model without unconserved sides chains):
PDB file :
Tito_4WFN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WFN-query.scw
PDB file :
Tito_Scwrl_4WFN.pdb
: