Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK
1ZIN Chain:A ((1-217))
MNLVLMGLPGAGKGTQAEKIVAAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPDEVTIGIVRERLSKDDCQNGFLLDGFPRTVAQAEALETMLADIGRKLDYVIHIDVRQDVLMERLTGRRICRNCGATYHLIFHPPAKPGVCDKCGGELYQRADDNEATVANRLEVNMKQMKPLVDFYEQKGYLRNINGEQDMEKVFADIRELLGGLAR
General information:
TITO was launched using:
RESULT:
Template:
1ZIN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90242 for 1672 contacts (-54.0/contact) +
2D Compatibility (PS) -23964 + (NN) -18359 + (LL) 0
1D Compatibility (HY) -29200 + (ID) 8100
Total energy: -169865.0 ( -101.59 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_1ZIN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZIN-query.scw
PDB file :
Tito_Scwrl_1ZIN.pdb
: