Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIREDEVRKLVGEMREPFLQRPLGELDAVKEIKIKPEKRHISVKVALAKTGTAEQMQIQQEIVNVLKGAGAETVGLRFEELPEETVAKFRAPSAEKKTLLNMDNPPVFLAVASGKGGVGKSTVSVNLAISLARLGKKVGLIDADIYGFSVPDMMGITVR------PTIEGEKLLPVERFGVKVMSMGFFVEENAPVVWRGPMLGKMLNNFFHEVEWGEVDYIVLDLPPGTGDVALDVHTMLPSCKEIIVSTPHPTAAFVAARAGSMAIKTDHEVVGVIENMAYYESAKTGE---REYVF------GK-GGGDKLAEE-----LNVPLLGRIPLKQPDWD-KDQFAPSVYDENHPIGEIYQDIAKKIDAKMSVQV |
| 3Q9L Chain:A ((4-246)) | -----------------------------------------------------------------------------------------------------------IIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDK-RTENLYILPASQTRDKDALTREGVAKVLDDLKAMDFEFIVCDSPAGIETGAL--MALYFADEAIITTNPEVS-----------SVRDSDRILGILASKS--RRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINADAGKAYADTVERL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128619 for 1822 contacts (-70.6/contact) +
2D Compatibility (PS) -22498 + (NN) 1318 + (LL) 11220
1D Compatibility (HY) -8800 + (ID) 3000
Total energy: -150379.0 ( -82.54 by residue)
QMean score : 0.420
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