Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYSKQWTRIILITSPFAIALSLLLSILYGAKHLSTDIVFTSLIHFDPGNTDHQIIWHSRIPRAAGALLIGAALAVSGALMQGITRNYLASPSIMGVSDGSAFIITLCMVLLPQSSSIEMMIYSFIGSALGAVLVFGLAAMMPNGFTPVQLAIIGTVTSMLLSSLSAAMSIYFQISQDLSFWYSARLHQMSPDFLKLAAPFFLIGIIMAISLSKKVTAVSLGDDISKSL---GQKKKTIKIMAMLSVIILTGSAVALAGKIAFVGLVVPHITRFLVGSDYSRLIPCSCILGGIFLTLCDLASRFINYPFETPIEVVTSIIGVPFFLYLIKRKGGEQNG |
2F95 Chain:B ((24-76)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFVGALTVLFGAIAYGEVTAAAATGDAAAVQEAAVSAILGLIILLGINLGLVA------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F95.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1733 for 252 contacts (6.9/contact) +
2D Compatibility (PS) -5181 + (NN) -1600 + (LL) 22252
1D Compatibility (HY) -4000 + (ID) 550
Total energy: 12654.0 ( 50.21 by residue)
QMean score : 0.142
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