Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQDISLSFYKPEHLPELQSFTLTNDDK----RFTSLPKEVLSQALGIQDRYPVVILKDDLPVGFFILHASKETLASYSNNPFALLLSSLSLTAVHHGKGYAKKAMLLLPAFVSGYFPWCDEIILAVNHLNIRAKHLYMKSGFLDKGRRRIGPLGEQLILHHFL
5F47 Chain:A ((8-148))
-DNFLKIERLAENDLPKFIQLIRLFEAVFEMKNFSIPDSEHLQKLLNQNNFYVFVALLENKIVGGLTSYVL-EQY--Y-SEKPLAYIYDLAVDTNWQRQGIGKKLITATNQFYTEK--GFEEVFVQADKVDDYALDFYRSTKPTAEEQ----------------
General information:
TITO was launched using:
RESULT:
Template:
5F47.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86072 for 919 contacts (-93.7/contact) +
2D Compatibility (PS) -15149 + (NN) -5300 + (LL) 1624
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -109547.0 ( -119.20 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_5F47.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5F47-query.scw
PDB file :
Tito_Scwrl_5F47.pdb
: