Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MIL-VSSCLGGIECRYNGSHAASEKIRKLVDEKK---------AVMACPELLGGFSTPREP-AEIIGGTGEDVLNGTAKIVTASGEDVTELYMEG--AAKTLAYAKEINASAVILKENSPSCGSGFIYNGTFSGKKITGSGVTAAL-LKQAGYRVISENELNDIL |
| 2GM3 Chain:A ((5-175)) | PTKVMVAVNASTIKDYPNPSISCKRAFEWTLEKIVRSNTSDFKILLLHVQVSIYASPEDFRDMRQSNKAKGLHLLEFFVNKCHEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVV-------GS----RGLGTVSAFCVKHAECPVMTIKRNADETPSDPADD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17948 for 988 contacts (-18.2/contact) +
2D Compatibility (PS) -14598 + (NN) 925 + (LL) 584
1D Compatibility (HY) -400 + (ID) 650
Total energy: -32087.0 ( -32.48 by residue)
QMean score : 0.185
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