Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLVSLSLSSLLTLFFIMLMASGISGLLFLHPRVPLSFVRIHIGILALPLLVSLLILANSGVSGNVGPWHLDSLACLMTFFVLAIGFIIQRFSVRYLMGDRSYRKYFTLFTFTTGAASMTWLSGDLRLMVLFWGATLVGLTLLIRLNSAWQVASEAAKISGRLFLLSWFSLFFAMMWLFHATGQWQLSLVVT--NESLAGLGEWERTGIQLLIVLAVIIPAAQWPFQRWLVESIVAPT-PVSAIMHAGLVNAGGIILTRFSPLFHGGIASIILLLLASISVLIGTGISLVQVDYKRQLVGSTIGQMGFMLIQCAL--------GAYIAAIIHLILHGLFKATLFLQAGSAVGRHEVSTRTNER------TSYLWVMAGRILSLVIGVAFWLTAPGDG-YHLISALILGWSLSVSWDQLVAFGEGRIGRIAGLTVLGGAALVYFIIHHLFYKWLHTTIFQSVQPPMSAVMIVVCLLLFGSALGTWVARHRSSVFFAVLYLWLVRLGEAKPKSVESHPDYLKQYIS |
4JP0 Chain:A ((2-381)) | -------LDTNKVYEISNHANGLYAATYLSLD---------------DSGVSLMNKNDDDIDD--------------------------------------YNLKWFLFPIDDD-----------QYIITSYAANNC---------KVWNVNN------DKINVSTYSSTNSIQKWQIKANGS---SYVIQSDNGKVLTAGTGQALGL-----IRLTDESSNNPNQQWNLTSVQTIQLPQKPIIDTKLKD---------YPKYSGNIDN-----------------------------GTSPQLMGWTLVPCIMVNDPNIDKNTQIKTTPYYILKKYQYWQRAVGSNVALRPHEKKSYTYEWGTEIDQKTTIINTLGFQINIDSGMKFDIPEVGGGTDEIKTQLNEELKIEYSHETKIMEKYQEQSEIDNPTDQSMNSIGFLTITSLELYRYNGSEIRIMQIQTS-----------DNDTYNVTSYPNHQQALLLLTNHSYEEVEEITNIPKSTLIKLKKH-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JP0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -333726 for 2779 contacts (-120.1/contact) +
2D Compatibility (PS) -37597 + (NN) 4409 + (LL) 15036
1D Compatibility (HY) -1200 + (ID) 3150
Total energy: -356228.0 ( -128.19 by residue)
QMean score : 0.073
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