Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLFTAVISVPMLLLAVSVLMSVIYDSMFKPMNHGMPFHRSFAYPAMIVVFLISLLLLAFLFSKSIHSLLHKINLLNQTIRHLASDQRVPDKIEVKRADEIGELIKSVNLLIERTTYRELELRQQEEIKKELLQKLRHDINTPLTALRLQLFYLEDQCHGQAVFESLYQQIEYISELTNEFNLYSAETLESSYIVNEEVRLN-------ELLETAVKKWDYLYSMSGIELHY---KPADQDVIWMS-NTLWMERLFDNIFQNTLRHS-KAKKMEVTIEHGD----VFIRDDGIG---------FD---------RNESSEGLGLKIIEDTCRLLAITYELHTNDNGTGFLFSKE |
4I5S Chain:A ((211-409)) | -----------------------------------------------------------------------------------------------------------------------------------FVSNVSHELRTPLTSVKSYLEALDDGALTESVAPSF---IKVSLDETNRMMRMITDLLSLSR-----SHLDVELTNFTAFMNYILDRFDQIQSQQST----EIIRDYPDKSVWIEIDTDKMTQVIDNILNNAIKYSPDGGKVTITMQTTDTQLILSISDQGLGIPKKDLPLIFDRFYRVDKAR------GLGLAIAKEIVK---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58740 for 973 contacts (-60.4/contact) +
2D Compatibility (PS) -16041 + (NN) -5165 + (LL) 15700
1D Compatibility (HY) -8800 + (ID) 2000
Total energy: -75046.0 ( -77.13 by residue)
QMean score : 0.298
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