Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMQQQEQQQGGMKVKVQRFGSYLSGMIMPNIGAFIAWGIITALF-----IPAGWFPNEQLNTLVSPMITYLLP-------LLIAYTGGKMIYDHRGGVVGATAAIGVIVGSDIPMFLGAMIMGPLGGYLIKQTDKLFKDKVKQGFEMLINNFTAGIVGAALTILAFYAIGPVVLTLNKLLAAGVEVIVHANLLPVASVFVEPAKVLFLNNAINHGILSPIGIEQASQTGKSILFLVEANPGPGLGILLAYMFFGKGSSKSTAPGAAIIHFFGGIHEIYFPYILMKPALILAAIAGGASGLLTFTIFNAGLVAAASPGSIIALMAMTPRGGYFGVLAGVLVAAAVSFIVSAVILKSSKASEEDLAAATEKMQSMKGKKSQAAAALEAEQAKAEEASELSPESVNKIIFACDAGMGSSAMGASILRNKVKKAELDISVTNTAINNLPSDADIVITHKDLTDRAKAKLPNATHISVDNFLNSPKYDELIEKLKK
3RKO Chain:L ((384-508))------------------------------AALSALPLVTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAH--AVKGVTHSLPLIVLLILSTFVGALIVPPLQGVLPQTTE------LAHG-SMLTLEITSGVVAVVGILLA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3RKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 259 -40204 -155.23 -355.79
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain L : 0.54

3D Compatibility (PKB) : -155.23
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.54
QMean score : -0.140

(partial model without unconserved sides chains):
PDB file : Tito_3RKO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RKO-query.scw
PDB file : Tito_Scwrl_3RKO.pdb: