Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKAKITAIGTYAPSRRLTNADLEKIVDTSDEWIVQRTGMRERRIADEHQFTSDLCIEAVKNLKSRYKGTLDDVDMILVATTTSDYAFPSTACRVQEYFGWESTGALDINATCAGLTYGLHLANGLITSGLHQKILVIAGETLSKVTDYTDRTTCVLFGDAAGALLVERDEETPGFLASVQGTSGNGGDILYRAGLRNEINGVQ--LVGSGKMVQNGREVYKWAARTVPGEFERLLHKAGLSSDDLDWFVPHSANLRMIESICEKTPFPIEKTLTSVEHYGNTSSVSIVLALDLAVKAGK--LKKDQIVLLFGFGGGLTYTGLLIKWGM
3IL4 Chain:A ((4-318))---ARISCTSRYVPENCVTNHQLSEMMDTSDEWIHSRTGISERRIVTQEN-TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKMLDWTDRSTAVLFGDGAAGVLIEA-AETPHFLNEKLQADGQRWTALTSGYTINESPFYQGHK--SKTLQMEGRSIFDFAIKDVSQNILSL-----VTDETVDYLLLHQASVRIIDKIARKTKISREKFLTNMDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFGGGLTWGSLLL----


General information:
TITO was launched using:
RESULT:

Template: 3IL4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2000 -214162 -107.08 -693.08
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -107.08
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_3IL4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IL4-query.scw
PDB file : Tito_Scwrl_3IL4.pdb: