Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNDFSLELPVRTNKPRETGQSILIDNGYPLQFFKDAIAGASDYIDFVKFGWGTSLL--TKDLEEKISTLKEH-DITFFFGGTLFEKYVSQKKVNEF-HRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSD-EFLVLSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEARESGTGGICSSSGDVRFQIVDDIISSDIDINRLIFEAPNKTLQQGFIQKIGPNVNLANIPFHDAIALETLRLGLRSDTFFL
3F4W Chain:A ((11-138))----------------------------TLPEAMVFMDKVVDDVDIIEVGTPFLIREGVNAIKAIK---EKYPHKEVLADAKIMD-------GGHFESQLLFDAGADYVTVLGVTDVL---TIQSCIRAAKEAGKQVVVDMICVD-------DLP---ARVRLLEEAGADMLAVHTGTD------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3F4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 545 -59978 -110.05 -487.63
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -110.05
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.372

(partial model without unconserved sides chains):
PDB file : Tito_3F4W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3F4W-query.scw
PDB file : Tito_Scwrl_3F4W.pdb: