Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNQTARSSKKERYANLIPMEELHSEKDRLFPFPIYDKLRRESP---VRYDPLRDCWDVFKYDDVQFVLKNPKLFSSKRGIQT----------ESILTMDPPKHTKLRALVSRAFTPKAVKQLETRIKDVTAFLLQE--ARQKSTIDIIEDFAGPLPVIIIAEMLGAPIEDRHLIKTYSDVLVAGAKDSSDKAVADMVHNRRDGHAFLSDYFRDILSKRRAEPKEDLMTMLLQ-AEIDGEYLTEEQLIGFCILLLVAGNETTTNLIANAVRYLTEDSVVQQQVRQNTDNVANVIEETLRYYSPVQ-AIGRVATEDTELGGVFIKKGSSVISWIASANRDEDKFCKPDCFKIDRPSYPHLSFGFGIHFCLGAPLARLEANIALSSLLSMSACIEKAAHDEKLEAIPSPFVFGVKRLPVRITFK
3ZK5 Chain:A ((48-424))-------------------------------PYPTYARLRAEGPAHRVRTPEGNEVWLVVGYDRARAVLADPRFSKDWRNSTTPLTEAEAALNHNMLESDPPRHTRLRKLVAREFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPITVISELLGVPEPDRAAFRVWTDAFVF--PDDPAQAQTAM--------AEMSGYLSRLIDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWYPNPMIRGLKALPIR----


General information:
TITO was launched using:
RESULT:

Template: 3ZK5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1775 -201720 -113.65 -560.33
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -113.65
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.492

(partial model without unconserved sides chains):
PDB file : Tito_3ZK5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZK5-query.scw
PDB file : Tito_Scwrl_3ZK5.pdb: