Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSELLDALTILEKEKGISKEIIIEAIEAALISAYKRNFNQAQNVRVDLNRETGSIRVFARKDVVDEVYDQRLEISIEEAQGIHPEYMVGDVVEIEVT-PKDFGRIAAQTAKQVVTQRVREAERGVIYSEFIDREEDIMTGIVQRLDNKFIYVSLGKIEALLPVNEQMPN----ESYKPHDRIKVYITKVEKTTKGPQIYVSRTHPGLLKRLFEIEVPEIYDGTVELKSVAREAGDRSKISVRTDDPDVDPVGSCVGPKGQRVQAIVNELKGEKIDIVNWSSDPVEFVANALSPSKVLDVIVNEEEKATTVIVPDYQLSLAIGKRGQNARLAAKLTGWKIDIKSETDARELGIYPRELEEDDEPLFTEPETAESDE
4Q7J Chain:D ((60-173))------------------------------------------------------------------------------------LEIQVGDEVDVALDAVEDGFGETLLSREKAKRH----EAWITLEKAY--EDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQK--RNNVVVSRRAV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4Q7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 333 -45960 -138.02 -421.65
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain D : 0.59

3D Compatibility (PKB) : -138.02
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.364

(partial model without unconserved sides chains):
PDB file : Tito_4Q7J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q7J-query.scw
PDB file : Tito_Scwrl_4Q7J.pdb: