Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLERAVTYKNNGQINIILNGQKQVLTNAEAEAEYQAALQKNEAKHGILKEIEK-EMSALVGMEEMKRNIKEIYAWIFVNQKRAEQGLKVGKQALHMMFKGNPGTGKTTVARLIGKLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTRDLI---KKSLGGILFIDEAYSLAR------GGEKDFGKEAIDTLVKHMED-KQHEFILILAGYSRE--MDHFLSLNPGLQSRFPISIDFPDYSVTQLMEIAKRMIDEREYQLSQEAEWKLKDYLMTVKSTTSPIKFSNGRFVRNVIEKSIRAQAMRLLMGDQYLKSDLMTIKSQDLSIKEEASGSA
4EIW Chain:A ((27-211))-------------------------------------------RARVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVL---LVGPPGVGKTHLARAVAG---EARV----PFITASGSDFVEMFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTAIVVMAATNRPDILDPAL-LRPGRFDR-QIAIDAPD-----------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4EIW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 835 -95900 -114.85 -557.56
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -114.85
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_4EIW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EIW-query.scw
PDB file : Tito_Scwrl_4EIW.pdb: