Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNIGEIISNFEGIIGALLGVIVTLILTHILKHFGQIKFYIVDFEIYFKTDND--GWGTNVMPSKDEAKQIEIHSQIEIYNGAEIPKVLREIKFCFYKNTNLIVSVTPDDKATTEEFAEFGYYRDKLFNINLPSKQIIAINIIKFLNEKETKQVKKCNRVYLEAKDHNGKMYKVFLGEF
1JQA Chain:A ((262-317))--------------------------------------FTALEGEIHHLTHGEKVAFGTLVQLALEEHSQQEIERYIELYLCLDLPVTLEDIKL-------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1JQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 110 -4604 -41.85 -85.25
target 2D structure prediction score : 0.17
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -41.85
2D Compatibility (Sec. Struct. Predict.) : 0.17
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.171

(partial model without unconserved sides chains):
PDB file : Tito_1JQA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JQA-query.scw
PDB file : Tito_Scwrl_1JQA.pdb: