Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSTLRKDLIELFSQAGNEFISGQKISDALGCSRTAVWKHIEELRKEGYEVEAVRRKGYRLIKKPGKLSESEIRFGLKTEVMGQHLIYHDVLSSTQKTAHELANNNAPEGTLVVADKQTAGRGRMSRVWHSQEGNGVWMSLILRPDIPLQKTPQLTLLAAVAVVQGIEEAAGIQTDIKWPNDILINGKKTVGILTEMQAEEDRVRSVIIGIGINVNQQ-PNDFPDELKDIATSLSQAAGEKIDRAGVIQHILLCFEKRYRDYMTHGFTPIKLLWESYALGIGTNMRARTL-NGTFYGKALGIDDEGVLLLETNEG-IKKIYSADIELG
2DTH Chain:A ((2-232))--------------------------------------------------------------------------LGLKTSIIGRRVIYFQEITSTNEFAK---TSYLEEGTVIVADKQTMGHGRLNRKWESPEG-GLWLSIVLSPKVPQKDLPKIVFLGAVGVVETLKEFS-IDGRIKWPNDVLVNYKKIAGVLVEGKGDK-----IVLGIGLNVNNKVPNG--------ATSMKLELGSEVPLLSVFRSLITNLDRLYLNFLKNPMDILNLVRDNMILGV----RVKILGDGSFEGIAEDIDDFGRLIIRLDSGEVKKVIYGDVSL-


General information:
TITO was launched using:
RESULT:

Template: 2DTH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1255 -96241 -76.69 -422.11
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -76.69
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_2DTH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DTH-query.scw
PDB file : Tito_Scwrl_2DTH.pdb: