Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNKIYDWVDERLDITPMWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFVTVIQVLSGMFLTMYYVPDIKNAWESVYYLQNEVAFGQIVRGMHHWGASLVIVMMFLHTLRVFFQGAYKKPRELNWIVGVLIFFVMLGLGFTGYLLPWDMKALFATKVGLQIAEATPLIGTQVKTLLAGHPDIVGAQTLTRFFAIHVFFLPAALFGLMAAHFIMIRKQGISGPL
1ZRT Chain:C ((15-224))----IEKWLHDRLPIVGLVYDTIMIPTPKNLN-------WWWIWGIVLAFTLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRDVNGGWAMRYIHANGASLFFLAVYIHIFRGLYYGSYKAPREITWIVGMVIYLLMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPGIGPSIQAWLLGGPAVDNA-TLNRFFSLH-YLLPFVIAALVAIHIWAFHTTGNNNP-


General information:
TITO was launched using:
RESULT:

Template: 1ZRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 744 -127388 -171.22 -606.61
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain C : 0.79

3D Compatibility (PKB) : -171.22
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.301

(partial model without unconserved sides chains):
PDB file : Tito_1ZRT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ZRT-query.scw
PDB file : Tito_Scwrl_1ZRT.pdb: