Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTGYFLLEDGNKIEFELYPEAAPGTVANFEKLAN--EGF-YDGLTFHRVIPGFVSQGG-CPHGTGTGGPG-YTIKCETEGNPHTHEA-GALSMAHAGKDTGGSQFFIVHEPQPHLNGVHTVFGKVTSGLEFAKNM-----SNGDVMKEVRVEG
4DGC Chain:A ((19-158))------------RVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGNFTHHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITI--


General information:
TITO was launched using:
RESULT:

Template: 4DGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 630 25108 39.85 194.63
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : 39.85
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.538

(partial model without unconserved sides chains):
PDB file : Tito_4DGC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DGC-query.scw
PDB file : Tito_Scwrl_4DGC.pdb: