Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSLEEKTIAKEQIFSGKVIDLYVEDVELPNGKASKREIVKHPGAVAVLAVTDEGKIIMVKQFRKPLERTIVEIPAGKLEKGEEPEYTALRELEEETGYTAKKLTKITAFYTSPGFADEIVHVFLAEELSVLEEKRELDEDEFVEVMEVTLEDALKLVESREVYDAKTAYAIQYLQLKEALQAQK
1V8V Chain:A ((11-150))----------RTYLYRGRILNLALE---------GRYEIVEHKPAVAVIALR-EGRMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGLSG-DLTYLFSYFVSPGFTDEKTHVFLAENLKEVEA-------EAIEVVWMRPEEALERHQRGEV----------------------


General information:
TITO was launched using:
RESULT:

Template: 1V8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 530 -54583 -102.99 -404.32
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -102.99
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.409

(partial model without unconserved sides chains):
PDB file : Tito_1V8V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1V8V-query.scw
PDB file : Tito_Scwrl_1V8V.pdb: