Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNEKNIKHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR-CNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPK-NQSYKIFGNIPYNISTDIIRKIVF--DSIADEIYLIVEYGFAKRLLNTKRS--LALFLMAEVDISILSMVPREYFHPKPKVNSSLIRLNRKKSRISHKDKQKYNYFVMKWVNKEYKKIFTKNQFNNSLKHAGIDD---LNNISFEQFLSLFNSYKLFNK
3R9X Chain:B ((13-240))------------LVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENL--KSIGDERLEVINEDASKFPFCSLGKELKVVGNLPYNVASLIIENTVYNKDCVPLAVFM-VQKEVAEKLQGKKDTGWLSVFVRTFYDVNYVMTVPPRFFVPPPKVQSAVIKL-VKNEKFPVKDLKNYKKFLTK-IFQNRRKVLRKKIPEELLKEAGINPDARVEQLSLEDFFKLY--------


General information:
TITO was launched using:
RESULT:

Template: 3R9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1029 8325 8.09 38.01
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : 8.09
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.488

(partial model without unconserved sides chains):
PDB file : Tito_3R9X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3R9X-query.scw
PDB file : Tito_Scwrl_3R9X.pdb: