Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELH---FVDVPGYGFAKVSKSEREAWGRMIETYITTR-EELKAVVQIVD-LRHAPSNDDVQMYEFLKYYGIPVIVIATKADKIP-KGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEAWGAIKKMINR
1EGA Chain:A ((11-173))-------------------------IAIVGRPNVGKSTLLNKLLGQK-ISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPG-----LHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTP--DDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNF---LDIVPISAETGLNVDTIAAIVRKHL--


General information:
TITO was launched using:
RESULT:

Template: 1EGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 673 6157 9.15 39.21
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : 9.15
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_1EGA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EGA-query.scw
PDB file : Tito_Scwrl_1EGA.pdb: