Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKLIQLALFFTLMLTGCSNSSTSSESKVETTVKTTAAFPQKELEKELKKLKPVSLDMKFESPLATELGKRKAKEEAEKQRQIAAEKKLEKEREAKRKKQQEEKAERQRLAEQQAAERQRLAEAERQAELERQRQAAIQKEQKANAEKKRQSQAQRQQTEAPSSNSQDPPSSSSQTDKTIQQPASELPDDDGYGYEERKKWHDDQVEWGIKQGYIDPEDAP
3VEM Chain:A ((1732-1800))-----------------------------------------------------------FNDPFLHEL--EKLRRESENSKKTFEEKKSILKAELERKMAEVQAEFRRKFHEVEAEHNTRTTKIEKDKNL-------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3VEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 15 1132 75.43 16.40
target 2D structure prediction score : 0.94
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 75.43
2D Compatibility (Sec. Struct. Predict.) : 0.94
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 1.027

(partial model without unconserved sides chains):
PDB file : Tito_3VEM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VEM-query.scw
PDB file : Tito_Scwrl_3VEM.pdb: