Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTDQRRNVYFFHKQDQETNEQARSLTQLAEEHGFTVVNQHSDANIIASIGGDGTFLQAVRKTNFR-DDCLYVGITKKGKAHLYCDFHSDEREKMVDAMTFEQIEVRKYPLIEVTVD---QASPFHCLNEVSIRSSIIKTFVMDVLIDDLHFETFRGDGMIISTPTGSTAYNKSVAGAVVDPLLPCMQVSELASLNNNTYRTLGSPFVLSSDRKLTLRVVQDGNEHPIIGLDNEALSTRNVKTIEIKLSNKKIKTVKLKDNSFWEKVKRTFL
2I2F Chain:A ((35-262))-----------------------------------------EPEIVISIGGNGTFLSAFHQYEERLDEIAFIGI-HTGHLGFYADWRPAEADKLVKLLAKGEYQKVSYPLLKTTVKYGKKEATYLALNESTVKSSG-GPFVVDVVINDIHFERFRGDGLCMSTPSGTTAYNKSLGGALMHPSIEAMQLTEMASINNRVYRTIGSPLVFPKHHVVSLQPVNDKDFQ--ISVDHLSILHRDVQEIRYEVSAKKIHFARFRSFPFWRRVHDSFI


General information:
TITO was launched using:
RESULT:

Template: 2I2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1162 22792 19.61 102.67
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : 19.61
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.415

(partial model without unconserved sides chains):
PDB file : Tito_2I2F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2I2F-query.scw
PDB file : Tito_Scwrl_2I2F.pdb: