Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMTSRKLSDILKQRLQHENRSFLFDREKDTLRVEDQTTKKGITLDLPPIIAKWELKKDEAIDEIVYYVSEAMTAMEGKAQEMTGKETRIYPVIRSTSFPDKSSEDIPLIYDDHTAETRIYYALDLGKTYRLIDQRML--EKENWTKERIRETAAFNLRSLPTVVKEDTVAGNYFYFFRANDGYDASRILNEAILNEYKQHAEGELAISVPHQDVLILADIRNESGYDILGQMSMSFFAGGTVPITALSFLYNEGKLEPVFILAKSRPKKD
5CZ3 Chain:A ((123-152))--------------------------------------------------------------------------------------------------------------------DTRRYYILDSGRTYTYIDPFISDGDKRRWL-----------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5CZ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 17 -1970 -115.88 -70.36
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -115.88
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.352

(partial model without unconserved sides chains):
PDB file : Tito_5CZ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CZ3-query.scw
PDB file : Tito_Scwrl_5CZ3.pdb: