Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------MPSITKQIMSGAKWTSISTMCITIIQIVQFALLGNMMTLTEFGLVGMITTVTVFAQIVLDMG-FGAALIQRDDATERQLSTLYWLNIMTGVLLFVLLYVSSPVIAGFYQREELVFLVRILAIMFLIAPIGQQYQYMLQKQLH---------FNTLSKIEIFSNVLSFGYLAIAVFMMDAILAYVISQVLL--------QSSKGILYWAVYRKKWHPAFVFD------LRGMKDFF------------SFGAFQLSSRLVNRLGANI--DMILIGRFIGAEALGIYN-LAYQIVTIPVLKINPIVTRVAFPI--FAKNKYENSVIREGFLNMTKMLAL--VSFPLLIGLV--SVSDAFITAVFGEKWLAAVPILNVLAIVGILRVLMNPNGSVLLAKGRADLAFYWD--SGVLLLYGLSLFAAVQTG-SLLTVAWVYAIISVVNFLIGRWLLAYV-----IKLNLSAYFQSIMKPFLITAAMGIIAFGVSLSTEHFSMQAEMRLAISVAAGALCYLFLLVKAYPQTKSKLLRKGRLS
3EPO Chain:A ((5-546))STIKAVAETISTGPIPGSRKVYQAGELFPEL---RVPFREVAVHPSANEP-PVTIYDPSGPYSDPAIQIDIEKGLPRTREALVVARGDVEEVADPRQVPEFPDTGRKIYRAKPGKLVTQLEYARAGI-----ITAEMEYVAIRENLRREQDRPCVRDGEDFGASIPDFVTPEFVRQEIARGRAIIPANINHGELEPMAIGRNFLVKINANIGNTVADEVDKLVWATRWGADTVMDLSTGRNIHNIRDWIIRNSSVPIGTVPIYQALEKVNGVAEDLNWEVFRDTLIEQCEQGVDYFTIHAGVRLPFIPMTAKRVTGIVSRGGSIMAKWCLAHHKENFLYERFDEICEIMRAYDVSFSLGDGLRPGSTADANDEAQFSE--LRTLGELTKVAWKHGVQVMIEGPGHVAMHKIKANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWF----GTAMLCYVTPKEHLGLPDRDDVKTGVITYKLAAHAADLAKGHPGAAMWDDAISRARFEFRWEDQFN------LGLDPETARKFH------


General information:
TITO was launched using:
RESULT:

Template: 3EPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2719 -124941 -45.95 -273.99
target 2D structure prediction score : 0.37
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -45.95
2D Compatibility (Sec. Struct. Predict.) : 0.37
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.248

(partial model without unconserved sides chains):
PDB file : Tito_3EPO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EPO-query.scw
PDB file : Tito_Scwrl_3EPO.pdb: