Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMREEEK-----------KTSQVKKLQQFFRKRWVFPAIYLVSAAVILTAVLWYQSVSNDEVKDQLADNGGNSAYDNNDDAVEVGKSMENVAMPVVDSENVSVVKKFYETDAAKEEKEAALVTYNNTYSLSKGIDLAEKDGKDFDVSASLSGTVVKAEKDPVLGYVVEVEHADGLSTVYQSLSEVSVEQGDKVKQNQVIGKSGKNLYSEDSGNHVHFEIRKDGVAMNPLNFMDKPVSSIEKAATQETEESIQQSSEKKDGSTEKGTEEKSGEKKDDSTDKSGSKESSTTEDTEQS
2HSI Chain:A ((25-281))SFIMRLLNKPVPGGVAVVDLGEEGPPPRAFYQGKPVLVVREEGRRWIAVVGIPLSTKPGPQKLEVRAATGNHEERFSVGSKPEDLKRIERELAEQTAAY----RRFSPGLPSNLMLDKPVDGPLSSPFPHSGLDFAVPAGT--PIKAPAAGKVILIGDYFFNGKTVFVDHGQGFISMFCHLSKIDVKLGQQVPRGGVLGKVGA--TGRATGPHMHWNVSLNDARVDPAIFIGAFQ-----------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2HSI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1174 46257 39.40 214.15
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 39.40
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.171

(partial model without unconserved sides chains):
PDB file : Tito_2HSI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HSI-query.scw
PDB file : Tito_Scwrl_2HSI.pdb: