Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----MKALIPKQHG-------AWAMLLIPFLLG----MVKGGPVIWHIPL----FLGWLFLYLAVYPVTLALKKKQSKPYQKWMCYYG----FPTCCFLMISVFHK--PPLIWVGVSLLP-LFLIHMYFA--------RRKNERALLNDVAGVLF----FCSGGFASCWLGMGTLDGWAWFIFLQSALFFI-GSSFYVKSV-IRERKNRAFAYWSW--GYHLLL--------------PFLSALFGAGWAFL----AFIPSSLRAWFFHGRDWPVKTIGILEIVNACFFLAV-----MCLFITR-----
4MUO Chain:A ((1-320))MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGAFCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYANPQRCPQINLIDREGMRVLYEKQAKDPETTAQWIERCLAGSEPIPESLKIQMACCLVATGEAATISDGLARVNQAF


General information:
TITO was launched using:
RESULT:

Template: 4MUO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1233 -85055 -68.98 -355.88
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -68.98
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.258

(partial model without unconserved sides chains):
PDB file : Tito_4MUO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MUO-query.scw
PDB file : Tito_Scwrl_4MUO.pdb: