Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLHKERRIGRLSVLLLLNEAEESTQVEELERDGWKVCLGKVGSMDAHKVVAAIETASKKSGVIQSEGYRESHALYHATMEALHGVTRGEMLLGSLLRTVGLRFAVLRGNPYESEAEGDWIAVSLYGTIGAPIKGLEHETFGVGINHI
4H4L Chain:H ((2-148))-TLHKERRIGRLSVLLLLNEA----QVEELERDGWKVCLGKVGSMDAHKVIAAIETASKKSGVIQSEGYRESHALYHATMEALHGVTRGEMLLGSLLRTVGLRFAVLRGNPYESEAEGDWIAVSLYGTIGAPIKGLEHETFGVGINHI


General information:
TITO was launched using:
RESULT:

Template: 4H4L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 684 -99490 -145.45 -695.73
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain H : 0.99

3D Compatibility (PKB) : -145.45
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.99
QMean score : 0.589

(partial model without unconserved sides chains):
PDB file : Tito_4H4L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4H4L-query.scw
PDB file : Tito_Scwrl_4H4L.pdb: