Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGSVDRPDQNRGERSMKSPGLDLVRRTLDEARAAARARGQDAGRGRVASVASGRVAGRRRSWSGPGPDIRDPQPLGKAARELAKKRGWSVRVAEGMVLGQWSAVVGHQIAEHARPTALNDGVLSVIAESTAWATQLRIMQAQLLAKIAAAVGNDVVRSLKITGPAAPSWRKGPRHIAGRGPRDTYG |
2K3M Chain:A ((25-151)) | MSD-------------------------FDTERVSRAVAAALVGPGGVALVVKVCA--------GLPGVIHTPA-----------RRGFFRCNPERIQIGDWR----YEVAHDGRLLAAHMVNGIVIAEDALIAEAVGPHLARALGQIVCRYGATVIPNINAAIEVLGT-----------GTDYRF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K3M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13004 for 714 contacts (18.2/contact) +
2D Compatibility (PS) -13016 + (NN) -1613 + (LL) 2556
1D Compatibility (HY) -4000 + (ID) 1500
Total energy: -4569.0 ( -6.40 by residue)
QMean score : 0.053
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