Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKSKVRKKNDFTVSAVSRTPMKVKVGPSSVWFVSLFIGLMLIGLIWLMVFQLAAIGSQAPTALNWMAQLGPWNYAIAFAFMITGLLLTMRWH
3CEJ Chain:A ((513-545))
---AKVKQENKLKFSQFLETEYKVKINPSSMFDVQV---------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3CEJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5015 for 136 contacts (36.9/contact) +
2D Compatibility (PS) -3565 + (NN) -1066 + (LL) 6076
1D Compatibility (HY) -4000 + (ID) 600
Total energy: 1860.0 ( 13.68 by residue)
QMean score : 0.032
(partial model without unconserved sides chains):
PDB file :
Tito_3CEJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CEJ-query.scw
PDB file :
Tito_Scwrl_3CEJ.pdb
: