Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYSEVELLSRAHQLFAGDSRRPGLDAGTTPYGDLLSRAADLNVGAGQRRYQLAVDHSRAALLSAARTDAAAGAVITGAQRDRAWARRSTGTVLDEARSDTTVTAVMPIAQREAIRRRVARLRAQRAHVLTARRRARRHLAALRALRYRVAHGPGVALAKLRLPSPSGRAGIAVHAALSRLGRPYVW---GATGPNQ----------FDCSGLVQWAYAQAGVHLDRTTYQQINEGIPVPRSQVRPGDLVFPHPGHVQLA---IGNNLVVEAPHAGASVRVSSLGNNVQIRRPLSGR |
| 3GT2 Chain:A ((18-127)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------VVIARGLSQRGVPFSWAGGGINGPTRGTGTGANTVGFDASGLMQYAYAGAGIKLPRSSGAMYRVGQKILPQQARKGDLIFYGPEGTQSVAMYLGNNQMLE---VGDVVQVSPV------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GT2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44568 for 616 contacts (-72.4/contact) +
2D Compatibility (PS) -10072 + (NN) -5221 + (LL) 13144
1D Compatibility (HY) -5600 + (ID) 1900
Total energy: -54217.0 ( -88.01 by residue)
QMean score : 0.483
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