Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVTWLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLEYLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT |
| 3RKO Chain:A ((15-126)) | ---------------------------------------------------------------AFAIFLIVAIGLCCLMLVGGWFLGGRARAR-----LRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGALDWT---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3432 for 481 contacts (-7.1/contact) +
2D Compatibility (PS) -9474 + (NN) 4021 + (LL) 4532
1D Compatibility (HY) -5200 + (ID) 950
Total energy: -10503.0 ( -21.84 by residue)
QMean score : -0.030
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