Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITYGSGDLLRADTEALVNTVNCVGVMGKGIALQFKRRYPEMFTAYEKACKR-GEVTIGKMFVVDTGQLDGPKHIINFPTKKHWRAPSKLAYIDAGLIDLIRVIRELNIASVAVPPLGVGNGGLDWEDVEQRLVSAFQQLPDVDAVIYPPSGGSRAIEGVEGLRMTWGRAVILEAMRRYLQQRRAMEPWEDPAGISHLEIQKLMYFANEADPDLALDFTPGRYGPYSERVRHLLQGMEGAFTVGLGDGTARVLANQPISLTTKGTDAITDYLATDAAADRVSAAVDTVLRVIEGFEGPYGVELLASTHWVATREGAKEPATAAAAVRKWTKRKGRIYSDDRIGVALDRILMTA |
4JGK Chain:A ((4-138)) | -IRHVQGDITEFQGDAIVNAANNYLKLGAGVAGAILRKGG---PSIQEECDRIGKIRVGEAAVTGAGNLP-VRYVIHAAVLGD--EPASLETVRKATKSALEKAVELGLKTVAFTGVGAWVGGLPAEAVYRVMLEEIKKAPD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83697 for 1077 contacts (-77.7/contact) +
2D Compatibility (PS) -14923 + (NN) -7871 + (LL) 15304
1D Compatibility (HY) -3600 + (ID) 1650
Total energy: -96437.0 ( -89.54 by residue)
QMean score : 0.621
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