Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRAST---GLGEVWRCLRCGDFALGGPQGRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGEQLLDLERAAMLT |
| 1E8J Chain:A ((6-44)) | ----------------CTVCGY-EYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1E8J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -11944 for 171 contacts (-69.8/contact) +
2D Compatibility (PS) -3746 + (NN) -151 + (LL) 20568
1D Compatibility (HY) -2000 + (ID) 500
Total energy: 2227.0 ( 13.02 by residue)
QMean score : -0.158
|
|
|