Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDRILAAVCDVLYIDEADLIDGDETDL-RDLGLDSVRFVLLMKQL----GVNRQSELPSRLAANPSIAGWLRELEAVCTEFG
2QNW Chain:A ((10-80))
--ERVKDVVADQLGVDRARIN--PESNFIKDLDADSLDSVELVMAFEEKFGVS--IPDE-EASKIATVQDALSYIEKA-----
General information:
TITO was launched using:
RESULT:
Template:
2QNW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42286 for 417 contacts (-101.4/contact) +
2D Compatibility (PS) -7125 + (NN) -3677 + (LL) 424
1D Compatibility (HY) -1600 + (ID) 850
Total energy: -55114.0 ( -132.17 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_2QNW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QNW-query.scw
PDB file :
Tito_Scwrl_2QNW.pdb
: