Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRSDTLATKLPWSDWLSRQRWYAGRNRELATVKPGVVVALRHNLDLVLVDVTYTDGATERYQVLVGWDFEPASEYGTKAAIGVADDRTGFDALYDVAGPQFLLSLIVSSAVCGTSTGEVTFTREPDVELPFAAQPRVCDAEQ--SNTSVIF---DRRAILKVFRRVSSGINPDIELNRVLTRAGNPHVARLLGAYQFGRPNRSPTDALAYALGMVTEYEANAAEGWAMATASVRDLFAEGDLYAHEVGGDFAGESYRLGEAVASVHATLADSLGTAQA------TFPVDRMLA---RLSS---------TV-AVVPELREYAPTIEQQFQKLAA---E-AITVQRVHGDLHLGQVLRTP-ESWLLIDFEGEPGQPLDERRAPDSPLRDVAGVLRSFEYAAYGPLVDQATDKQLAARAREWVERNRAAFCDGYAVASGIDPRDSALLLGAYELDKAVYETGYETRHRPGWLPIPLRSIARLTAS |
| 3I1A Chain:A ((24-292)) | -------------------------------------------------------------------------------------------------------------------------------------HTAQFIQGGADTNAFAYQADSESKSYFIKLKYGYH--DEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQ-----LKHFKIIAYPFIHAPNGFT----Q-----------------NLTGKQWKQLGKVLRQIHETSVPISIQQQLRKEIYSPKWREIVRSFYNQIEFDNSDDKLTAAFKSFFNQNSAAIHRLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVGNEESIYIIDWDE---------PMLAPKERDLMFIGGGVGN-------------------VWNKPHEIQYFYEGYGEINV-D----KTILSYYRHERIVEDIAVY--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33244 for 1699 contacts (-19.6/contact) +
2D Compatibility (PS) -24668 + (NN) 1314 + (LL) 13036
1D Compatibility (HY) -6800 + (ID) 1550
Total energy: -51912.0 ( -30.55 by residue)
QMean score : 0.217
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